STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY08213.1Hypothetical protein; KEGG: cth:Cthe_2264 0.0074 H+-transporting two-sector ATPase, E subunit; K02121 V-type H+-transporting ATPase subunit E. (90 aa)    
Predicted Functional Partners:
EKY08214.1
Hypothetical protein.
       0.762
EKY03478.1
Hypothetical protein; KEGG: nmc:NMC0781 3.8e-58 pcnB; putative poly(A) polymerase K00970; Psort location: Cytoplasmic, score: 9.26.
  
     0.667
EKY03508.1
Putative uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
     0.607
EKY08215.1
YceI-like domain protein; Belongs to the UPF0312 family.
       0.562
EKY07191.1
Stringent starvation protein B.
  
     0.523
EKY08696.1
Hypothetical protein; KEGG: pic:PICST_58506 0.0048 NUO13; NADH-ubiquinone oxidoreductase K03939.
  
     0.491
EKY08212.1
ABC transporter substrate binding protein; KEGG: mpt:Mpe_A1645 0.00039 copF; P1 ATPase/HMA domain-containing protein K01533.
       0.484
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
     0.452
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
 
     0.449
EKY03506.1
Putative hemY protein; KEGG: eci:UTI89_C4361 1.5e-10 hemY; putative protoheme IX biogenesis protein K02498; Psort location: CytoplasmicMembrane, score: 9.97.
  
     0.449
Your Current Organism:
Neisseria sp. F0370
NCBI taxonomy Id: 1127694
Other names: N. sp. oral taxon 020 str. F0370, Neisseria sp. oral taxon 020 str. F0370
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.