STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY07191.1Stringent starvation protein B. (150 aa)    
Predicted Functional Partners:
EKY07190.1
Putative stringent starvation protein A; KEGG: bur:Bcep18194_A3542 1.5e-77 glutathione S-transferase K03599; Psort location: Cytoplasmic, score: 9.97; Belongs to the GST superfamily.
 
  
 0.983
EKY03478.1
Hypothetical protein; KEGG: nmc:NMC0781 3.8e-58 pcnB; putative poly(A) polymerase K00970; Psort location: Cytoplasmic, score: 9.26.
  
     0.763
bamE
SmpA / OmlA family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.734
lpxH
UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
     0.710
ftsB
Putative cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.696
EKY06204.1
DsbA-like protein; KEGG: ngo:NGO1548 5.7e-55 DsbA K03673; Psort location: Periplasmic, score: 9.76.
  
     0.686
tatA
Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
    0.641
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
  
 0.638
clpX
ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
    
 
 0.636
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.631
Your Current Organism:
Neisseria sp. F0370
NCBI taxonomy Id: 1127694
Other names: N. sp. oral taxon 020 str. F0370, Neisseria sp. oral taxon 020 str. F0370
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.