STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY04276.1ABC transporter, substrate-binding protein; KEGG: sah:SaurJH1_2478 9.9e-08 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 9.82. (282 aa)    
Predicted Functional Partners:
EKY04277.1
KEGG: bvu:BVU_1102 2.4e-79 putative metal ABC transporter, ATP-binding protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.999
EKY03264.1
KEGG: apb:SAR116_2225 1.0e-23 ABC transporter, membrane spanning protein, zinc K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.992
EKY04275.1
SNARE-like domain protein; KEGG: oih:OB2407 1.0e-09 alkaline phosphatase K01077; Psort location: CytoplasmicMembrane, score: 10.00.
       0.752
EKX96879.1
FeoA domain protein; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.711
rpsN
Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.558
EKY04271.1
THUMP domain protein; KEGG: fba:FIC_01642 1.5e-77 methyltransferase K07444; Psort location: Cytoplasmic, score: 9.97; Belongs to the methyltransferase superfamily.
       0.542
EKY04272.1
KEGG: pmz:HMPREF0659_A6751 1.5e-246 peptidase, S9A/B/C family, catalytic domain protein K01278; Psort location: Cytoplasmic, score: 9.26.
       0.542
purD
KEGG: pmz:HMPREF0659_A6752 8.1e-182 purD; phosphoribosylamine--glycine ligase K01945; Psort location: Cytoplasmic, score: 9.97; Belongs to the GARS family.
       0.542
EKY04274.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.542
EKY04270.1
Putative serine O-acetyltransferase; KEGG: bth:BT_3256 8.3e-102 serine acetyltransferase; K00640 serine O-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.529
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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