STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY04281.1Hypothetical protein; KEGG: nwi:Nwi_0782 1.1e-08 integrase, catalytic region K00986. (71 aa)    
Predicted Functional Partners:
EKY04280.1
Hypothetical protein; KEGG: nwi:Nwi_0870 2.3e-49 helix-turn-helix, fis-type K00986; Psort location: Cytoplasmic, score: 8.96.
 
     0.878
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
     
  0.692
EKY04282.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.618
EKY04283.1
Hypothetical protein.
       0.557
EKY04284.1
Hypothetical protein.
       0.557
EKX98766.1
Hypothetical protein; KEGG: scb:SCAB_3481 2.7e-21 putative levanase; K01212 levanase.
  
     0.465
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.