Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY04093.1IPT/TIG domain protein; KEGG: rcu:RCOM_1435490 5.3e-10 2-deoxyglucose-6-phosphate phosphatase, putative. (438 aa)    
Predicted Functional Partners:
EKY04094.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
 
     0.791
EKY04095.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
 
     0.772
EKY04047.1
SusD family protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.732
EKY04092.1
KEGG: bfr:BF0330 3.4e-183 beta-glucosidase; K01188 beta-glucosidase; Psort location: Periplasmic, score: 9.76.
       0.709
EKY04048.1
Hypothetical protein.
       0.561
EKY04049.1
Bacterial group 2 Ig-like protein; KEGG: hut:Huta_1961 2.3e-14 endo-1,4-beta-xylanase.
       0.554
EKX98459.1
Hypothetical protein.
  
     0.502
EKY02853.1
Phage tail component protein.
  
 
   0.477
EKY01816.1
Hypothetical protein.
  
     0.432
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
       0.430
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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