Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
EKY04057.1SusD family protein. (575 aa)    
Predicted Functional Partners:
EKY04058.1
TonB-dependent receptor; KEGG: ddd:Dda3937_04300 0.00016 fepA; TonB-dependent receptor; outer membrane receptor for ferrienterochelin and colicins K02014; Psort location: OuterMembrane, score: 9.52.
 
     0.929
EKY04050.1
Hypothetical protein.
 
 
   0.830
EKY03610.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.92.
  
 
   0.787
EKX97109.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 7.7e-06 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 9.52.
  
 
   0.780
EKY02086.1
Zinc-dependent metalloproteinase lipoprotein, BF0631 family; Psort location: OuterMembrane, score: 9.52.
  
     0.748
EKY00028.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.724
EKY04052.1
Hypothetical protein.
   
   0.715
EKY04055.1
Glycosyl hydrolase, family 88; KEGG: rle:pRL120662 7.4e-46 ugl; putative unsaturated glucuronyl hydrolase; K01238; Psort location: Cytoplasmic, score: 9.26.
 
     0.712
EKY04056.1
Hypothetical protein.
       0.703
EKY04051.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A6937 0.0029 M6 family metalloprotease domain protein.
   
   0.678
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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