STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03873.1Hypothetical protein; KEGG: bth:BT_3982 3.0e-136 exonuclease V subunit alpha; K01144 exodeoxyribonuclease V; Psort location: Cytoplasmic, score: 8.96. (476 aa)    
Predicted Functional Partners:
EKY03874.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.597
EKX99623.1
UvrD/REP helicase.
 
 
 0.587
EKY03875.1
RNA methyltransferase, RsmD family; KEGG: fps:FP0986 3.1e-31 modification methyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.551
EKY03138.1
KEGG: pmz:HMPREF0659_A7395 3.4e-48 acetyltransferase, GNAT family; K00657 diamine N-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
    0.549
EKY03129.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
  0.481
EKX99113.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.470
EKY02871.1
Hypothetical protein; Belongs to the TrpF family.
  
     0.466
purL
Putative phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
    0.457
EKY04279.1
Hypothetical protein; KEGG: edi:EDI_341030 6.1e-15 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
  
     0.436
EKX99624.1
Hypothetical protein; KEGG: sde:Sde_2004 6.3e-06 DNA helicase/exodeoxyribonuclease V, subunit B; Psort location: Cytoplasmic, score: 8.96.
  
     0.436
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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