Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03885.1Hypothetical protein; KEGG: cco:CCC13826_0805 7.3e-39 3-dehydroquinate dehydratase (3-dehydroquinase; type IIDHQase) K07133; Psort location: Cytoplasmic, score: 8.96. (395 aa)    
Predicted Functional Partners:
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
       0.729
EKY03886.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
 
     0.637
EKX98580.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.596
EKY04297.1
Hypothetical protein.
  
     0.588
EKY02645.1
DNA-binding protein HU; KEGG: sce:YNL250W 0.0055 RAD50; Rad50p K10866; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name; Belongs to the bacterial histone-like protein family.
  
     0.587
EKX96754.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.555
EKY00982.1
Hypothetical protein.
  
     0.550
EKX99200.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.542
EKY02333.1
Tetratricopeptide repeat protein; KEGG: bcy:Bcer98_3248 0.0037 pheT; phenylalanyl-tRNA synthetase subunit beta K01890.
  
     0.512
EKY01582.1
Hypothetical protein.
  
     0.501
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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