Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EKY03889.1Oxidoreductase, NAD-binding domain protein; KEGG: sli:Slin_0605 8.9e-89 alpha-N-acetylgalactosaminidase. (517 aa)    
Predicted Functional Partners:
EKX97116.1
Mucin-desulfating sulfatase; KEGG: pmz:HMPREF0659_A6445 1.2e-123 mdsC; mucin-desulfating sulfatase; Psort location: Cytoplasmic, score: 8.96.
 
     0.639
EKX99323.1
Galactokinase; KEGG: pmz:HMPREF0659_A6474 4.9e-175 galK; galactokinase K00849; Psort location: Cytoplasmic, score: 8.96; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.638
EKY03679.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: bth:BT_1051 8.0e-223 beta-hexosaminidase precursor; K12373 beta-hexosaminidase; Psort location: Periplasmic, score: 9.76.
  
     0.596
EKY03806.1
beta-L-N-acetylhexosaminidase family protein; KEGG: pru:PRU_1156 3.5e-165 family 20 glycosyl hydrolase; K12373 beta-hexosaminidase; Psort location: Periplasmic, score: 9.76.
  
     0.570
uvrB
Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
       0.563
lysS
lysine--tRNA ligase; KEGG: pmz:HMPREF0659_A6046 7.2e-261 lysS; lysine--tRNA ligase K04567; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.495
EKY02097.1
Oxidoreductase, NAD-binding domain protein; KEGG: sat:SYN_02682 5.0e-08 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.96.
 
 
  0.445
EKX97262.1
Alpha-galactosidase; Overlaps another CDS with the same product name.
  
  
  0.428
EKY02370.1
Hypothetical protein.
 
  
 0.421
EKX97263.1
Alpha-galactosidase; Overlaps another CDS with the same product name.
  
  
  0.421
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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