STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03893.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (151 aa)    
Predicted Functional Partners:
EKY03892.1
Hypothetical protein; KEGG: tte:TTE1510 7.1e-05 rpoZ; DNA-directed RNA polymerase subunit omega K03060.
 
     0.856
EKY03891.1
Outer membrane assembly lipoprotein YfiO; KEGG: cco:CCC13826_1959 6.5e-07 tRNA (guanine-N(1)-)-methyltransferase K05807.
 
     0.769
uvrB
Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
       0.593
EKX98595.1
KEGG: gfo:GFO_2227 9.4e-11 LysM domain-containing proteins K01423.
  
     0.513
EKX97513.1
Antioxidant, AhpC/TSA family; KEGG: pmz:HMPREF0659_A5110 4.1e-100 antioxidant, AhpC/TSA family.
  
     0.462
EKY02944.1
KEGG: pru:PRU_0989 1.9e-246 M49 family peptidase K01277; Psort location: Cytoplasmic, score: 8.96.
  
     0.422
EKY04297.1
Hypothetical protein.
  
     0.419
EKY03138.1
KEGG: pmz:HMPREF0659_A7395 3.4e-48 acetyltransferase, GNAT family; K00657 diamine N-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
     0.417
EKY00982.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.