STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03809.1KEGG: pmz:HMPREF0659_A6216 1.4e-115 Ser/Thr phosphatase family protein; K03269 UDP-2,3-diacylglucosamine hydrolase; Psort location: Cytoplasmic, score: 9.97. (252 aa)    
Predicted Functional Partners:
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
  
  
 0.895
EKX99504.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
  
 0.895
EKX98785.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
   
 0.721
EKY02342.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.626
EKY03810.1
Putative FeS assembly SUF system protein; KEGG: mpl:Mpal_1220 4.3e-14 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 8.96.
       0.600
lpxC
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
   
 0.599
EKY00009.1
Outer membrane protein, OMP85 family; KEGG: apb:SAR116_0511 7.4e-16 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
  
     0.593
EKY03280.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.559
EKY03090.1
Tetratricopeptide repeat protein.
  
     0.558
EKX95920.1
KEGG: pmz:HMPREF0659_A6173 7.0e-160 PPIC-type PPIase domain protein; K03771 peptidyl-prolyl cis-trans isomerase SurA; Psort location: Periplasmic, score: 9.76.
  
     0.544
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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