STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03811.1Peptidase, M56 family; KEGG: scl:sce7487 9.4e-07 ftsI3; penicillin-binding transpeptidase; Psort location: CytoplasmicMembrane, score: 10.00. (406 aa)    
Predicted Functional Partners:
EKY03812.1
Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 1.0e-07 blaI; beta-lactamase (penicillinase) repressor K07737.
 
 
 0.989
EKY02937.1
OmpA family protein; KEGG: apb:SAR116_2300 3.3e-09 peptidoglycan-associated lipoprotein K03640; Psort location: OuterMembrane, score: 9.93.
   
 
 0.683
EKY00754.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
  
  0.654
EKX98162.1
Hypothetical protein.
  
  0.637
EKY02940.1
Hypothetical protein.
  
   0.627
EKY03610.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.92.
  
  0.626
EKY01580.1
KEGG: gfo:GFO_0229 5.0e-06 M23 family peptidase K01417.
  
  
  0.590
EKY01229.1
KEGG: sfu:Sfum_2744 1.8e-07 TonB-dependent receptor; K01802 peptidylprolyl isomerase; Psort location: OuterMembrane, score: 9.92.
  
  0.585
EKY01113.1
Hypothetical protein.
    
  0.581
EKX97109.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 7.7e-06 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 9.52.
  
  0.576
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.