Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY03611.1SusD family protein. (677 aa)    
Predicted Functional Partners:
EKY03610.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.92.
 
 
   0.939
EKY03097.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
  
     0.762
EKX97526.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
  
 
   0.748
EKY02038.1
Hypothetical protein; KEGG: cja:CJA_0006 0.00056 amy13G; alpha-amylase, putative, amy13G; Psort location: Periplasmic, score: 9.84.
  
  0.642
EKY04058.1
TonB-dependent receptor; KEGG: ddd:Dda3937_04300 0.00016 fepA; TonB-dependent receptor; outer membrane receptor for ferrienterochelin and colicins K02014; Psort location: OuterMembrane, score: 9.52.
  
     0.625
EKX99197.1
Hypothetical protein; KEGG: rmr:Rmar_2469 2.0e-24 pectinesterase K01051.
  
     0.616
EKY01975.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.0012 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 9.49.
  
 
   0.567
EKY03573.1
KEGG: pmz:HMPREF0659_A5875 5.2e-180 N-acylglucosamine 2-epimerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.530
EKY00028.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.520
EKX99603.1
Glycosyl hydrolase, family 43; KEGG: bde:BDP_0131 1.9e-37 endo-1,4-beta-xylanase; Psort location: OuterMembrane, score: 9.49.
  
 
  0.520
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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