Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY03622.1LICD family protein; KEGG: lbu:LBUL_1801 1.6e-43 LPS biosynthesis protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 8.96. (320 aa)    
Predicted Functional Partners:
EKX96116.1
KEGG: hsm:HSM_0545 1.2e-27 LicD family protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 8.96.
  
  
 
0.561
EKY00576.1
LICD family protein.
  
  
 
0.559
EKX96124.1
LICD family protein; KEGG: sjj:SPJ_1187 4.0e-31 phosphotransferase; K07271 lipopolysaccharide cholinephosphotransferase.
  
  
 
0.552
EKX99744.1
Hypothetical protein.
  
     0.510
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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