Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY03630.1O-methyltransferase; KEGG: pmz:HMPREF0659_A6336 1.4e-83 O-methyltransferase; Psort location: Cytoplasmic, score: 9.97. (229 aa)    
Predicted Functional Partners:
EKY01972.1
KEGG: pru:PRU_2301 8.0e-120 idnO; gluconate 5-dehydrogenase K00046; Psort location: Cytoplasmic, score: 9.26.
 
  
   0.762
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
  
    0.730
xerC
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.609
EKY01020.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
   0.584
EKY00128.1
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; KEGG: bvu:BVU_1011 1.4e-76 3-oxoacyl-[acyl-carrier protein] reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase; Psort location: Cytoplasmic, score: 9.26.
 
  
   0.528
EKX98496.1
Transporter, DASS family; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.482
EKY03296.1
KEGG: pru:PRU_0610 5.9e-195 U32 family peptidase K08303; Psort location: Cytoplasmic, score: 8.96.
  
    0.449
EKX98923.1
Putative collagenase; KEGG: pmz:HMPREF0659_A6397 7.8e-177 peptidase, U32 family K08303; Psort location: Cytoplasmic, score: 8.96.
  
    0.449
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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