STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dacATIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (255 aa)    
Predicted Functional Partners:
EKY02367.1
Phosphoglucosamine mutase; KEGG: pmz:HMPREF0659_A5955 8.9e-192 glmM; phosphoglucosamine mutase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.750
EKX99490.1
KEGG: bfr:BF1478 8.6e-242 phosphoglucomutase phosphomannomutase; K01840 phosphomannomutase; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.750
EKY03632.1
KEGG: pru:PRU_2262 1.4e-83 folP; dihydropteroate synthase K00796; Psort location: Cytoplasmic, score: 9.97.
       0.740
EKY03633.1
Antioxidant, AhpC/TSA family; KEGG: bay:RBAM_021290 5.0e-15 resA; thiol-disulfide oxidoreductase; Psort location: CytoplasmicMembrane, score: 7.88.
       0.658
EKX99611.1
YbbR-like protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.621
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.544
EKY00022.1
7TM receptor with intracellular HD hydrolase; KEGG: bmd:BMD_4538 2.4e-63 metal-dependent phosphohydrolase K07037; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.492
nnrD
YjeF domain protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
 
     0.442
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
 
     0.400
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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