STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03639.1Peptidase C10 family protein; KEGG: soz:Spy49_1690c 2.8e-25 speB; streptococcal cysteine protease (streptopain) / streptococcal pyrogenic exotoxin B (SpeB). (807 aa)    
Predicted Functional Partners:
EKY02098.1
Radical SAM domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.606
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.596
EKY03640.1
Cyclic nucleotide-binding domain protein; KEGG: bbo:BBOV_I004690 0.0015 19.m02237; cGMP dependent protein kinase K07376; Psort location: Cytoplasmic, score: 8.96.
       0.548
EKX99496.1
FHA domain protein; Psort location: Cytoplasmic, score: 8.96.
    
   0.510
EKX97249.1
Peptidase, S8/S53 family.
    
   0.501
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
       0.471
EKY00497.1
Hypothetical protein.
  
     0.468
EKY00806.1
Hypothetical protein.
  
     0.428
EKX98299.1
Putative gliding motility-associated lipoprotein GldK; KEGG: xtr:549170 4.0e-20 sumf1, fge; sulfatase modifying factor 1 K13444.
  
 
 0.423
EKY02097.1
Oxidoreductase, NAD-binding domain protein; KEGG: sat:SYN_02682 5.0e-08 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.96.
  
     0.413
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.