Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03420.1Hypothetical protein. (52 aa)    
Predicted Functional Partners:
EKY03421.1
Biotin-requiring enzyme; KEGG: bth:BT_1688 4.9e-33 biotin carboxyl carrier protein (BccP); K01606 methylmalonyl-CoA decarboxylase gamma chain; Psort location: Cytoplasmic, score: 9.26.
       0.825
EKY03419.1
Carboxyl transferase domain protein; KEGG: bfs:BF3128 2.7e-213 mmdA; putative methylmalonyl-CoA decarboxylase, alpha-subunit; Psort location: Cytoplasmic, score: 9.97.
       0.749
asnA
Aspartate--ammonia ligase; KEGG: pru:PRU_1711 3.9e-150 asnA; aspartate--ammonia ligase K01914; Psort location: Cytoplasmic, score: 10.00.
       0.495
EKY03422.1
Hypothetical protein.
       0.444
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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