STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03425.1KEGG: pru:PRU_0992 6.8e-91 glycogen synthase-like protein; K00703 starch synthase; Psort location: Cytoplasmic, score: 8.96. (270 aa)    
Predicted Functional Partners:
EKX98600.1
KEGG: pmz:HMPREF0659_A6687 0. alpha amylase, catalytic domain protein; K00700 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.995
EKX99330.1
KEGG: pmz:HMPREF0659_A6343 0. glgP; alpha-glucan phosphorylase K00688; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.966
EKX98399.1
Pullulanase, type I; KEGG: pru:PRU_2749 1.4e-234 pulA; pullulanase, type I K01200; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.931
EKX98401.1
KEGG: pmz:HMPREF0659_A5155 0. putative 4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.917
EKY03099.1
KEGG: pmz:HMPREF0659_A5930 1.5e-198 glycosyltransferase, group 1 family protein; Psort location: Cytoplasmic, score: 8.96.
     
  0.829
EKY03427.1
Hypothetical protein.
  
    0.732
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
    0.675
EKY03428.1
Hypothetical protein.
       0.645
EKY03582.1
Alpha amylase, catalytic domain protein; KEGG: ccb:Clocel_4279 8.4e-109 alpha amylase catalytic region; K05343 maltose alpha-D-glucosyltransferase.
 
 
 0.630
EKY02684.1
Alpha amylase, catalytic domain protein.
  
 
 0.609
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.