Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03427.1Hypothetical protein. (468 aa)    
Predicted Functional Partners:
EKY00006.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
  
   0.966
EKY01222.1
KEGG: pdi:BDI_3202 8.2e-15 putative FKBP-type peptidyl-prolyl cis-trans isomerase 1; K01802 peptidylprolyl isomerase.
  
 
   0.925
EKX99541.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
 
 
   0.892
EKY00009.1
Outer membrane protein, OMP85 family; KEGG: apb:SAR116_0511 7.4e-16 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
    
   0.886
EKY02705.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
 
 
   0.873
EKY02368.1
Hypothetical protein.
    
   0.847
EKY03891.1
Outer membrane assembly lipoprotein YfiO; KEGG: cco:CCC13826_1959 6.5e-07 tRNA (guanine-N(1)-)-methyltransferase K05807.
  
   0.836
EKY03277.1
Outer membrane protein, OMP85 family; Psort location: OuterMembrane, score: 9.49.
  
 
   0.822
EKY01821.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
 
 
   0.816
EKY03886.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.774
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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