STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03448.1Peptidase, S8/S53 family; KEGG: pmz:HMPREF0659_A5832 9.7e-131 peptidase families S8 and S53. (467 aa)    
Predicted Functional Partners:
EKY03449.1
Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
  
    0.806
EKX96858.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
 
   0.775
EKY03450.1
Putative exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
       0.769
EKX99555.1
Hypothetical protein.
  
 
   0.707
EKY02955.1
Outer membrane insertion signal domain protein.
  
 
   0.678
EKY03808.1
Peptidase, M28 family; KEGG: pmz:HMPREF0659_A5088 2.0e-116 peptidase, M28 family.
  
  
 0.554
EKY03451.1
KEGG: pru:PRU_0166 4.1e-155 ilvE; branched-chain-amino-acid transaminase K00826; Psort location: Cytoplasmic, score: 9.26.
       0.553
EKY03616.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type family protein; KEGG: pru:PRU_2861 4.0e-118 mip; peptidyl-prolyl cis-trans isomerase Mip; Psort location: OuterMembrane, score: 9.93.
   
   0.546
EKY03617.1
KEGG: pmz:HMPREF0659_A5083 1.2e-79 putative outer membrane protein MIP; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB; Psort location: Cytoplasmic, score: 9.97.
   
   0.546
EKY01222.1
KEGG: pdi:BDI_3202 8.2e-15 putative FKBP-type peptidyl-prolyl cis-trans isomerase 1; K01802 peptidylprolyl isomerase.
   
   0.546
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.