STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03457.1Von Willebrand factor type A domain protein; Psort location: CytoplasmicMembrane, score: 10.00. (332 aa)    
Predicted Functional Partners:
EKY03454.1
ATPase family protein; KEGG: pru:PRU_0756 1.8e-145 hypothetical protein; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.952
EKY03455.1
Hypothetical protein; Psort location: Cytoplasmic, score: 9.97.
 
    0.946
EKY03456.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.909
EKY03459.1
Tetratricopeptide repeat protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.890
EKY03458.1
Von Willebrand factor type A domain protein; KEGG: edi:EDI_350180 1.2e-07 small glutamine-rich tetratricopeptide repeat-containing protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.731
EKX99665.1
Hypothetical protein; KEGG: cbe:Cbei_4631 2.0e-06 LicD family protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 8.96.
    
 0.437
EKY03453.1
KEGG: pmz:HMPREF0659_A6704 6.4e-95 putative tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.406
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.