Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY03470.1Transporter, major facilitator family protein; KEGG: bmd:BMD_0780 2.6e-08 narK; nitrite extrusion protein K02575; Psort location: CytoplasmicMembrane, score: 10.00. (459 aa)    
Predicted Functional Partners:
EKY03469.1
KEGG: pmz:HMPREF0659_A6994 9.2e-293 peptidase, S9A/B/C family, catalytic domain protein.
 
     0.801
EKY03468.1
Hypothetical protein.
       0.637
EKY01579.1
Peptidase, C69 family; KEGG: ddd:Dda3937_03172 7.6e-44 dipeptidase-related protein; Psort location: CytoplasmicMembrane, score: 9.86.
  
     0.625
EKX99331.1
Starch synthase; KEGG: pru:PRU_0670 8.4e-196 glycogen synthase family protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.617
EKX98405.1
Tetratricopeptide repeat protein; KEGG: rba:RB12434 0.00048 ogt; O-GlcNAc transferase; Psort location: Extracellular, score: 9.64.
  
     0.528
EKY02977.1
KEGG: pru:PRU_2034 3.1e-237 acyl-CoA dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
  
  0.480
EKX98593.1
KEGG: emi:Emin_0922 3.5e-39 amino acid/peptide transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.479
EKY03467.1
Hypothetical protein.
       0.474
EKY01484.1
Hypothetical protein.
  
  
 0.469
EKY00520.1
KEGG: pmz:HMPREF0659_A5772 1.6e-73 nrfH; cytochrome c nitrate reductase, small subunit; Psort location: CytoplasmicMembrane, score: 9.82.
     
 0.437
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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