Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03264.1KEGG: apb:SAR116_2225 1.0e-23 ABC transporter, membrane spanning protein, zinc K09816; Psort location: CytoplasmicMembrane, score: 10.00. (275 aa)    
Predicted Functional Partners:
EKY04277.1
KEGG: bvu:BVU_1102 2.4e-79 putative metal ABC transporter, ATP-binding protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.999
EKY04276.1
ABC transporter, substrate-binding protein; KEGG: sah:SaurJH1_2478 9.9e-08 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.992
EKY03265.1
Hypothetical protein.
 
     0.829
aroA
Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.801
EKX96879.1
FeoA domain protein; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.713
EKY03262.1
PglZ domain protein; KEGG: mct:MCR_0763 4.4e-12 narL; two-component system nitrate/nitrite response regulator NarL K07684; Psort location: Cytoplasmic, score: 9.97.
       0.613
EKY03263.1
Tetratricopeptide repeat protein.
       0.613
EKY00015.1
Efflux ABC transporter, permease protein; KEGG: apb:SAR116_0522 6.4e-31 ABC-type transport system, permease component K09808; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.561
EKY03261.1
Hydrolase, P-loop family; KEGG: cms:CMS_0521 8.3e-08 alr*; putative alanine racemase fusion protein K01775; Psort location: Cytoplasmic, score: 9.97.
       0.547
EKX98439.1
Putative ferrichrome ABC transporter, ATP-binding protein FhuC; KEGG: bfs:BF2248 6.2e-65 putative iron transport related ATP-binding protein; K02013 iron complex transport system ATP-binding protein.
    
 0.483
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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