Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03269.1Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00391570 1.7e-09 DNA polymerase family B containing protein K02350; Psort location: Cytoplasmic, score: 8.96. (473 aa)    
Predicted Functional Partners:
EKX99725.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: aci:ACIAD0595 3.8e-11 putative sensory transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.813
EKY03268.1
glutamine--tRNA ligase; KEGG: pmz:HMPREF0659_A6665 1.5e-269 glnS; glutamine--tRNA ligase K01886; Psort location: Cytoplasmic, score: 9.97.
   
   0.708
EKY03270.1
SNARE-like domain protein; KEGG: lac:LBA0945 3.5e-23 alkaline phosphatase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.664
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.650
EKX99726.1
Response regulator receiver domain protein; KEGG: ava:Ava_B0209 2.0e-06 two component LuxR family transcriptional regulator K02479; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.643
EKX99830.1
KEGG: cyb:CYB_1515 1.4e-30 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
 
 
 0.637
EKY02866.1
Hypothetical protein.
    
  0.616
EKY03513.1
Hypothetical protein; KEGG: gfo:GFO_2701 1.1e-14 transmembrane family-2 glycosyl transferase K00754; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.611
EKY02009.1
KEGG: pmz:HMPREF0659_A6220 2.0e-132 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 9.46.
   
 
 0.611
EKX98601.1
MORN repeat protein; KEGG: tgo:TGME49_110440 9.5e-69 phosphatidylinositol-4-phosphate 5-kinase, putative.
  
 
   0.605
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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