STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03283.1KEGG: pmz:HMPREF0659_A6812 2.2e-124 putative D-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (305 aa)    
Predicted Functional Partners:
serC
Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
 
 0.994
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.928
EKX98588.1
KEGG: pru:PRU_1017 3.2e-148 putative homoserine kinase; K01834 phosphoglycerate mutase; Psort location: Cytoplasmic, score: 8.96.
     
  0.829
EKY03284.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.821
EKX98396.1
KEGG: pmz:HMPREF0659_A6356 1.6e-231 phosphoribulokinase/uridine kinase family protein; K00876 uridine kinase; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.811
udk
Uridine kinase; KEGG: pmz:HMPREF0659_A7128 1.2e-91 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 9.97.
    
  0.783
EKX99509.1
KEGG: pmz:HMPREF0659_A5803 4.0e-141 putative D-lactate dehydrogenase; K03778 D-lactate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
0.767
EKY03285.1
YigZ family protein; KEGG: fnu:FN1907 5.5e-25 thymidylate synthase; Psort location: Cytoplasmic, score: 9.97.
       0.748
EKX99565.1
KEGG: pmz:HMPREF0659_A6863 0. malate dehydrogenase (oxaloacetate-decarboxylating) K00029; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.720
EKX98589.1
KEGG: pmz:HMPREF0659_A6944 0. homoserine dehydrogenase K12524; Psort location: CytoplasmicMembrane, score: 8.46.
  
 
 0.682
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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