Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY03301.1KEGG: sax:USA300HOU_0258 4.6e-76 gatC1; PTS family galactitol (gat) porter component IIC K02775; Psort location: CytoplasmicMembrane, score: 10.00. (464 aa)    
Predicted Functional Partners:
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
  
    0.831
EKY03299.1
KEGG: pmz:HMPREF0659_A6937 7.9e-113 M6 family metalloprotease domain protein.
       0.773
EKY03302.1
Hypothetical protein.
       0.723
EKY02097.1
Oxidoreductase, NAD-binding domain protein; KEGG: sat:SYN_02682 5.0e-08 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.532
EKX99724.1
KDPG and KHG aldolase; KEGG: pdi:BDI_3185 3.8e-81 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625; Psort location: Cytoplasmic, score: 9.97.
 
 
  0.484
EKY03303.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.433
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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