STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY03137.1KEGG: pmz:HMPREF0659_A7396 7.6e-115 glycosyltransferase, group 2 family protein; Psort location: Cytoplasmic, score: 8.96. (397 aa)    
Predicted Functional Partners:
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.825
EKY03136.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.825
EKY03138.1
KEGG: pmz:HMPREF0659_A7395 3.4e-48 acetyltransferase, GNAT family; K00657 diamine N-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.825
EKY03134.1
Tetratricopeptide repeat protein.
       0.752
EKY02358.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.555
EKY02955.1
Outer membrane insertion signal domain protein.
  
     0.531
EKX96554.1
Hypothetical protein; KEGG: dfe:Dfer_0792 0.0011 histidine kinase.
  
     0.525
EKX96859.1
Hypothetical protein.
  
    0.514
EKY03075.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
  
     0.486
EKY03132.1
Hypothetical protein.
 
     0.448
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.