STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02939.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (171 aa)    
Predicted Functional Partners:
EKY02938.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: apb:SAR116_2296 1.8e-05 biopolymer transport protein K03562; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.840
EKY02940.1
Hypothetical protein.
  
    0.688
EKY02941.1
Hypothetical protein.
       0.676
EKY02942.1
KEGG: apb:SAR116_2220 1.4e-12 transcriptional regulator, AsnC family; Psort location: Cytoplasmic, score: 9.97.
       0.566
EKY02937.1
OmpA family protein; KEGG: apb:SAR116_2300 3.3e-09 peptidoglycan-associated lipoprotein K03640; Psort location: OuterMembrane, score: 9.93.
       0.510
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.