Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY02957.1Polyprenyl synthetase; KEGG: pmz:HMPREF0659_A7168 5.1e-118 polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II; Psort location: Cytoplasmic, score: 9.26. (324 aa)    
Predicted Functional Partners:
EKY00008.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.955
cmk
Cytidylate kinase; KEGG: pru:PRU_1828 2.6e-91 cmk; cytidylate kinase K00945; Psort location: Cytoplasmic, score: 9.97.
 
 
  0.897
EKX96451.1
Polyprenyl synthetase; KEGG: pmz:HMPREF0659_A5037 5.7e-110 polyprenyl synthetase; K02523 octaprenyl diphosphate synthase; Psort location: Cytoplasmic, score: 9.97.
  
  
 
0.871
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
  
 
 0.857
EKY02958.1
Hydrolase, TatD family; KEGG: pru:PRU_1824 3.6e-85 NUDIX family hydrolase; K03424 TatD DNase family protein; Psort location: Cytoplasmic, score: 9.97.
   
   0.835
EKY02956.1
TonB-dependent receptor; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
       0.805
EKY02955.1
Outer membrane insertion signal domain protein.
       0.636
EKY03919.1
Methyltransferase domain protein; KEGG: rha:RHA1_ro03827 1.4e-10 ubiquinone/menaquinone methyltransferase K03183; Psort location: Cytoplasmic, score: 8.96.
   
 0.556
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
   
 0.556
EKY01430.1
Methyltransferase domain protein; KEGG: ssa:SSA_1664 1.2e-75 phosphatidylethanolamine N-methyltransferase, putative; Psort location: Cytoplasmic, score: 8.96.
   
 0.556
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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