STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY02972.1Tetratricopeptide repeat protein. (59 aa)    
Predicted Functional Partners:
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
    
  0.762
folD
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.706
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.644
EKY02973.1
KEGG: pmz:HMPREF0659_A5966 1.3e-160 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) K00174; Psort location: Cytoplasmic, score: 8.96.
       0.555
EKY02974.1
KEGG: pmz:HMPREF0659_A5965 6.0e-115 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Psort location: Cytoplasmic, score: 8.96.
       0.555
EKY02975.1
KEGG: pmz:HMPREF0659_A5964 4.4e-80 2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
       0.555
EKY02969.1
Endonuclease/exonuclease/phosphatase family protein; KEGG: bal:BACI_c11150 0.0014 endonuclease/exonuclease/phosphatase K07004; Psort location: Cytoplasmic, score: 8.96.
       0.428
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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