Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY02974.1KEGG: pmz:HMPREF0659_A5965 6.0e-115 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Psort location: Cytoplasmic, score: 8.96. (255 aa)    
Predicted Functional Partners:
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 0.999
EKY02975.1
KEGG: pmz:HMPREF0659_A5964 4.4e-80 2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
 0.999
EKY02973.1
KEGG: pmz:HMPREF0659_A5966 1.3e-160 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) K00174; Psort location: Cytoplasmic, score: 8.96.
 
 0.998
EKX97521.1
KEGG: pmz:HMPREF0659_A6381 1.2e-267 2-oxoacid:acceptor oxidoreductase, alpha subunit; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
 
 0.998
EKX99565.1
KEGG: pmz:HMPREF0659_A6863 0. malate dehydrogenase (oxaloacetate-decarboxylating) K00029; Psort location: Cytoplasmic, score: 9.97.
   
 0.889
EKY00506.1
AMP-binding enzyme; KEGG: pru:PRU_2205 2.1e-238 AMP-binding enzyme; K01895 acetyl-CoA synthetase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.875
EKX97520.1
Thiamine pyrophosphate enzyme, TPP binding domain protein; KEGG: pmz:HMPREF0659_A6380 1.0e-142 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175.
  
  
 
0.860
pgi
KEGG: pru:PRU_1785 8.1e-198 pgi; glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.97; Belongs to the GPI family.
    
 0.850
EKX98504.1
Pyruvate kinase; KEGG: pmz:HMPREF0659_A6470 1.5e-189 pyk; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 9.97.
   
 0.848
sucD
succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 
 0.845
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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