Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02988.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
EKY02989.1
KEGG: lsg:lse_0666 8.1e-40 glycoside hydrolase, family 76.
 
     0.922
EKY02987.1
SusD family protein.
 
     0.893
EKY02986.1
TonB-dependent receptor plug domain protein.
 
     0.867
EKY02081.1
SusD family protein.
  
     0.730
EKY02082.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
  
     0.706
EKY02083.1
Hypothetical protein.
  
     0.701
EKY04094.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
  
     0.558
EKY03143.1
TonB-dependent receptor plug domain protein.
  
     0.544
EKY03576.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
  
     0.538
EKY01975.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.0012 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 9.49.
  
     0.534
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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