Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
udkUridine kinase; KEGG: pmz:HMPREF0659_A7128 1.2e-91 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 9.97. (207 aa)    
Predicted Functional Partners:
EKX98446.1
KEGG: pmz:HMPREF0659_A6372 1.0e-96 putative uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
 0.951
EKY03074.1
Putative cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
 0.921
EKX98167.1
Helicase protein; KEGG: lsp:Bsph_0793 3.8e-17 ATP-dependent helicase YqhH; Psort location: Cytoplasmic, score: 8.96.
  
  0.877
EKX99646.1
5'-nucleotidase protein; KEGG: pmz:HMPREF0659_A5589 4.7e-202 5'-nucleotidase, C-terminal domain protein; K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Psort location: Periplasmic, score: 9.76; Belongs to the 5'-nucleotidase family.
  
 
  0.861
cmk
Cytidylate kinase; KEGG: pru:PRU_1828 2.6e-91 cmk; cytidylate kinase K00945; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.852
EKX98396.1
KEGG: pmz:HMPREF0659_A6356 1.6e-231 phosphoribulokinase/uridine kinase family protein; K00876 uridine kinase; Psort location: Cytoplasmic, score: 9.97.
  
  
  0.852
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
 
 0.851
EKX99628.1
Phosphorylase family protein; KEGG: bvu:BVU_3649 2.5e-116 purine nucleoside phosphorylase II; K00757 uridine phosphorylase; Psort location: Cytoplasmic, score: 9.97.
    
 0.847
pyrF
KEGG: pmz:HMPREF0659_A6727 4.6e-108 pyrF; orotidine 5'-phosphate decarboxylase K01591; Belongs to the OMP decarboxylase family. Type 2 subfamily.
   
 
 0.833
EKX97289.1
Ser/Thr phosphatase family protein.
   
 
  0.832
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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