Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02915.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (137 aa)    
Predicted Functional Partners:
EKY02912.1
Hypothetical protein.
     0.918
EKY02913.1
Hypothetical protein; KEGG: ssm:Spirs_4290 0.0050 putative transcriptional regulator; K03655 ATP-dependent DNA helicase RecG.
     0.906
EKY02914.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.755
EKY00578.1
Hypothetical protein; KEGG: ecb:100072606 5.2e-31 DNA2; DNA replication helicase 2 homolog (yeast); K10742 DNA replication ATP-dependent helicase Dna2; Psort location: Cytoplasmic, score: 8.96.
 
    0.647
EKX99530.1
Hypothetical protein.
  
     0.625
EKY03998.1
KEGG: chu:CHU_3450 2.0e-09 hypothetical protein K01238.
  
     0.614
EKX98168.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.600
EKX96161.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.580
EKY02076.1
Hypothetical protein; KEGG: tin:Tint_2201 1.0e-05 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.575
EKX96096.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.563
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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