STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02822.1Hemagglutinin protein HagC family protein. (302 aa)    
Predicted Functional Partners:
EKY02937.1
OmpA family protein; KEGG: apb:SAR116_2300 3.3e-09 peptidoglycan-associated lipoprotein K03640; Psort location: OuterMembrane, score: 9.93.
   
 
 0.638
EKY02938.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: apb:SAR116_2296 1.8e-05 biopolymer transport protein K03562; Psort location: CytoplasmicMembrane, score: 10.00.
   
   0.507
EKX98753.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: apb:SAR116_2296 7.9e-07 biopolymer transport protein K03562; Psort location: CytoplasmicMembrane, score: 10.00.
   
   0.507
EKY02940.1
Hypothetical protein.
   
   0.469
EKY02941.1
Hypothetical protein.
   
   0.469
EKX98754.1
Hypothetical protein.
   
   0.469
EKX98755.1
Hypothetical protein.
   
   0.469
EKY02823.1
Hypothetical protein.
       0.402
EKY02824.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.402
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.