Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY02837.1Hemerythrin HHE cation binding domain protein. (318 aa)    
Predicted Functional Partners:
EKY02836.1
Transcriptional regulator, LuxR family.
 
    
0.842
EKY02835.1
Hypothetical protein.
       0.532
EKY02838.1
Hypothetical protein.
       0.496
EKY03619.1
FMN-binding domain protein; KEGG: eci:UTI89_C2482 0.0027 napH; quinol dehydrogenase membrane component K02574; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.430
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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