Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02853.1Phage tail component protein. (958 aa)    
Predicted Functional Partners:
EKY01231.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
  
     0.774
EKY01816.1
Hypothetical protein.
  
     0.773
EKY00567.1
Fasciclin domain protein.
  
     0.757
EKY00565.1
SusD family protein.
  
 
   0.749
EKY00569.1
Hypothetical protein.
  
     0.748
EKX97037.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
    0.722
EKX99871.1
SusD family protein.
  
 
   0.719
EKX99124.1
M6 family metalloprotease domain protein; KEGG: pin:Ping_2144 1.2e-10 peptidase M6, immune inhibitor A; K09607 immune inhibitor A.
  
     0.711
EKY03430.1
Hypothetical protein.
  
     0.710
EKY04095.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
 
   0.692
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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