STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02874.1Plant Basic Secretory Protein. (232 aa)    
Predicted Functional Partners:
EKY02873.1
Putative alpha-1,2-mannosidase.
     0.816
EKY02875.1
Putative alpha-1,2-mannosidase.
     0.652
EKY02375.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.590
EKY02872.1
Peptidase C10 family protein.
       0.538
EKY03574.1
Ser/Thr phosphatase family protein; KEGG: cdu:CD36_18450 7.2e-24 calcineurin-like phosphoesterase, putative.
  
     0.481
EKY01114.1
Acyltransferase; KEGG: ddd:Dda3937_04140 1.2e-14 integral membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.465
EKX96942.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.465
EKY01974.1
SusD family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.412
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.