Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02646.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
EKX99613.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.669
EKY03090.1
Tetratricopeptide repeat protein.
  
     0.608
EKY02901.1
Hypothetical protein.
  
     0.607
EKY02647.1
Hypothetical protein; KEGG: apb:SAR116_1265 3.4e-12 predicted P-loop-containing kinase K06958; Psort location: Cytoplasmic, score: 8.96.
       0.590
EKY01818.1
Endonuclease/exonuclease/phosphatase family protein.
  
     0.579
EKX99541.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.570
EKY03280.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.568
EKY02648.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.530
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.525
EKY00512.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.513
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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