STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02647.1Hypothetical protein; KEGG: apb:SAR116_1265 3.4e-12 predicted P-loop-containing kinase K06958; Psort location: Cytoplasmic, score: 8.96. (514 aa)    
Predicted Functional Partners:
EKY02677.1
Nucleotidyl transferase.
 
 0.956
EKX99494.1
KEGG: pmz:HMPREF0659_A6906 2.0e-233 S1 RNA binding domain protein; K08301 ribonuclease G; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.755
EKY03573.1
KEGG: pmz:HMPREF0659_A5875 5.2e-180 N-acylglucosamine 2-epimerase; Psort location: Cytoplasmic, score: 8.96.
     
  0.736
EKY02648.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.689
EKY02826.1
Hypothetical protein.
  
 
 0.664
EKY02780.1
Hypothetical protein; KEGG: hsl:OE1114F 6.7e-13 graD3; sugar nucleotidyltransferase K00973; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.664
EKX97101.1
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
     
  0.640
EKX96442.1
Hypothetical protein.
  
     0.632
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.610
EKY02652.1
Tetratricopeptide repeat protein.
 
     0.601
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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