STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02690.1Phosphodiesterase family protein. (167 aa)    
Predicted Functional Partners:
EKY02688.1
MATE efflux family protein.
  
    0.825
EKY02689.1
Hypothetical protein.
       0.825
EKY02691.1
KEGG: pmz:HMPREF0659_A6853 1.3e-176 rfbB; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
       0.791
EKY02687.1
Hypothetical protein.
       0.714
EKY02692.1
WxcM-like protein.
       0.640
EKY02693.1
Hypothetical protein.
       0.640
EKY03892.1
Hypothetical protein; KEGG: tte:TTE1510 7.1e-05 rpoZ; DNA-directed RNA polymerase subunit omega K03060.
  
     0.553
EKY02694.1
Putative erythromycin biosynthesis sensory transduction protein EryC1; KEGG: sdl:Sdel_1781 1.5e-104 glutamine--scyllo-inositol transaminase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DegT/DnrJ/EryC1 family.
       0.545
EKX99536.1
KEGG: abu:Abu_1717 0.00065 hsdM; type I restriction-modification system, M subunit, putative.
  
     0.539
EKX99613.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.446
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.