Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY02702.1Hypothetical protein; KEGG: swp:swp_3771 1.2e-36 CBS domain protein; Psort location: CytoplasmicMembrane, score: 9.99. (424 aa)    
Predicted Functional Partners:
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.780
EKY02704.1
Hypothetical protein.
  
    0.704
EKY02701.1
Hypothetical protein; KEGG: pdi:BDI_0184 2.1e-87 peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D.
       0.589
EKY02705.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
       0.554
EKY02708.1
Type I phosphodiesterase / nucleotide pyrophosphatase; KEGG: fps:FP1761 2.9e-35 pafA; alkaline phosphatase.
  
   0.486
EKY02710.1
KEGG: lsg:lse_2128 2.3e-26 ABC transporter, ATP-binding protein.
 
   0.457
EKY02938.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: apb:SAR116_2296 1.8e-05 biopolymer transport protein K03562; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.428
EKY02707.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.421
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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