Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY02707.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (398 aa)    
Predicted Functional Partners:
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.963
EKY02708.1
Type I phosphodiesterase / nucleotide pyrophosphatase; KEGG: fps:FP1761 2.9e-35 pafA; alkaline phosphatase.
 
    0.847
EKX97521.1
KEGG: pmz:HMPREF0659_A6381 1.2e-267 2-oxoacid:acceptor oxidoreductase, alpha subunit; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
     
 0.640
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
       0.639
EKX99633.1
Respiratory-chain NADH dehydrogenase, subunit.
  
    0.617
EKY02710.1
KEGG: lsg:lse_2128 2.3e-26 ABC transporter, ATP-binding protein.
       0.603
EKY02705.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
 
     0.575
EKY03921.1
Putative ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
     0.546
EKY02868.1
Metallo-beta-lactamase domain protein.
   
 0.541
EKY02704.1
Hypothetical protein.
 
     0.540
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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