Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY02447.1RHS repeat-associated core domain protein. (452 aa)    
Predicted Functional Partners:
EKY02489.1
YD repeat protein; Psort location: Extracellular, score: 9.64.
     0.942
EKY02490.1
KEGG: npu:Npun_R5402 5.8e-06 FG-GAP repeat-containing protein; Psort location: OuterMembrane, score: 9.49.
     0.909
EKY02450.1
RHS repeat protein; KEGG: pfa:PFL1125w 0.00071 phospholipid-transporting ATPase, putative; K01529 K01530.
     0.875
EKX98230.1
Hypothetical protein.
 
     0.842
EKX98236.1
YD repeat protein; Psort location: Extracellular, score: 9.64.
 
     0.821
EKY02448.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EKX98234.1
FG-GAP repeat protein; KEGG: npu:Npun_F1457 1.7e-05 putative outer membrane adhesin like proteiin; Psort location: OuterMembrane, score: 9.49.
 
     0.722
EKY02449.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.574
EKY02420.1
Hypothetical protein.
 
    
0.560
EKY02419.1
RHS repeat-associated core domain protein.
 
    
0.451
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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