STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02355.1KEGG: spd:SPD_0322 4.4e-32 cps2G; glycosyl transferase, group 1 family protein K00754. (367 aa)    
Predicted Functional Partners:
EKX98600.1
KEGG: pmz:HMPREF0659_A6687 0. alpha amylase, catalytic domain protein; K00700 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 9.97.
   
  0.628
EKY02354.1
Radical SAM domain protein; KEGG: fnu:FN0127 5.1e-15 Fe-S oxidoreductase.
       0.605
EKY02356.1
Transcription termination/antitermination factor NusG; Psort location: Cytoplasmic, score: 8.96.
       0.520
EKX99330.1
KEGG: pmz:HMPREF0659_A6343 0. glgP; alpha-glucan phosphorylase K00688; Psort location: Cytoplasmic, score: 9.97.
   
  0.507
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.