Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY02359.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (182 aa)    
Predicted Functional Partners:
EKY02358.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
    0.814
EKY02360.1
Translocator protein, LysE family; KEGG: apb:SAR116_2438 3.6e-05 export protein (LysE); Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.805
EKY00031.1
3'-5' exonuclease; KEGG: pmz:HMPREF0659_A6957 9.1e-64 3'-5' exonuclease; Psort location: Cytoplasmic, score: 8.96.
  
     0.758
prfC
Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
 
     0.726
EKX98405.1
Tetratricopeptide repeat protein; KEGG: rba:RB12434 0.00048 ogt; O-GlcNAc transferase; Psort location: Extracellular, score: 9.64.
  
     0.718
EKX99856.1
Hypothetical protein; KEGG: edi:EDI_048910 1.6e-07 intracellular protein transport protein USO1.
  
     0.714
EKY02704.1
Hypothetical protein.
  
     0.706
EKX96754.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.658
EKX98580.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.635
EKX99623.1
UvrD/REP helicase.
  
     0.618
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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