Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY02360.1Translocator protein, LysE family; KEGG: apb:SAR116_2438 3.6e-05 export protein (LysE); Psort location: CytoplasmicMembrane, score: 10.00. (222 aa)    
Predicted Functional Partners:
EKY02359.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.805
EKY02358.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
       0.659
EKY02361.1
Putative glucokinase; KEGG: pru:PRU_0241 1.6e-137 glkA; glucokinase K00845; Psort location: Cytoplasmic, score: 9.26.
       0.613
prfC
Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
       0.574
EKX99856.1
Hypothetical protein; KEGG: edi:EDI_048910 1.6e-07 intracellular protein transport protein USO1.
  
     0.486
EKY02945.1
Hypothetical protein; KEGG: pgn:PGN_1645 1.7e-14 putative dipeptidyl-peptidase III; K01277 dipeptidyl-peptidase III; Psort location: Cytoplasmic, score: 8.96.
  
     0.419
EKY04297.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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