Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY02366.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
EKY02365.1
HAD hydrolase, family IA, variant 3; KEGG: rci:RCIX511 1.3e-23 pgmB-2; beta-phosphoglucomutase K01838.
       0.757
pgi
KEGG: pru:PRU_1785 8.1e-198 pgi; glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.97; Belongs to the GPI family.
       0.519
lysS
lysine--tRNA ligase; KEGG: pmz:HMPREF0659_A6046 7.2e-261 lysS; lysine--tRNA ligase K04567; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.402
EKY02363.1
NAD-dependent glycerol-3-phosphate dehydrogenase [NAD(P)+ ] protein; KEGG: pru:PRU_1692 1.7e-156 glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+); Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.402
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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