Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02375.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (395 aa)    
Predicted Functional Partners:
valS
valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.634
EKY02017.1
Hypothetical protein.
  
     0.629
EKX99217.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
  
     0.593
EKY02874.1
Plant Basic Secretory Protein.
  
     0.590
EKY04295.1
HD domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.566
EKY01974.1
SusD family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.532
EKY02373.1
Hypothetical protein.
       0.516
EKY03446.1
Hypothetical protein.
  
     0.511
EKX96157.1
Hypothetical protein.
  
     0.499
EKY01217.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.498
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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